PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G415100.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 575aa    MW: 63123 Da    PI: 6.9591
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G415100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.91.8e-08380427455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Aqcoe2G415100.1.p 380 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 427
                        8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.94E-17374445IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.02E-9374431No hitNo description
Gene3DG3DSA:4.10.280.101.4E-16376444IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.523376426IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-5380427IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.6E-9382432IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 575 aa     Download sequence    Send to blast
MEKEFFGNAN ATSPSPHLSY RPSISISSPQ DMEIQANDRL PNCFLNLNWE NSMDHGVHFD  60
SALSSFVSSP AASNSRGASE SVVIRELIGR LGSICNSNDI STQQSQTLNY MGEGNNSTNT  120
SCYSTPLNSP PKLNNLSMLD HQLPMPNHPG LAPFSTDPGF AERAARYSCF GTKSLGGLMG  180
QFGFNDLEMP QRSTRLVENG KLSRVSSSHS LKATGSLMNA QEQERLEEQM RSIPASVSDR  240
RFTNKLSRSS SPDNAEFNNA AFEKPLASES IQIEEANMKS VNDVNARKRK TAPKSKAKDI  300
TSLSSSSKDA KEATDDDKSN GKRSKSNDTN GNEKASAKAK GEPNSGDGAK KQNKDTPKPS  360
PEPPKDYIHV RARRGQATDS HSLAERVRRE KISERMKFLQ DLVPGCNKVT GKALMLDEII  420
NYVQSLQRQV EFLSMKLATV NPRLDFNMEA TLTKDLLQSR ESLSQAMYQL NSSVSAFHYG  480
HQGEGTPVQR EISNRTETQS SMNPLGPTLQ RNTSLELPPL DGFGEAAAHF ANFWEDDLQS  540
VVQMGFNQNQ SQESGFEIHS FQGSLSTANM KVEL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010243164.10.0PREDICTED: transcription factor bHLH62-like
TrEMBLA5AD410.0A5AD41_VITVI; Putative uncharacterized protein
STRINGVIT_05s0029g00390.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.11e-71bHLH family protein